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  5. Solyc05g051820

Solyc05g051820


Description : Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** G7LAE8_MEDTR)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g051820
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Bradi1g70700 No alias farnesylated protein 6 0.03 Orthogroups_2024-Update
Bradi2g35700 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g40160 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g28920 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Brara.F02568.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03270.1 No alias Unknown function 0.01 Orthogroups_2024-Update
GRMZM2G085086 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G157900 No alias Heavy metal transport/detoxification superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G112000 No alias copper chaperone 0.02 Orthogroups_2024-Update
Glyma.11G238000 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G332001 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G022900 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G001000 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G072500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G011060.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G025770.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G057730.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g61070 No alias heavy metal-associated domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g05010 No alias heavy-metal-associated domain-containing protein,... 0.03 Orthogroups_2024-Update
MA_165810g0010 No alias (at5g02600 : 105.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
MA_2930g0010 No alias (at4g39700 : 176.0) Heavy metal transport/detoxification... 0.04 Orthogroups_2024-Update
MA_38922g0010 No alias (at1g71050 : 145.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
PSME_00037850-RA No alias (at2g28660 : 97.1) Chloroplast-targeted copper chaperone... 0.03 Orthogroups_2024-Update
PSME_00045895-RA No alias (at1g71050 : 186.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Potri.013G017700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G123400 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G322600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G324300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G034900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G137900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc11g007200 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 34 88
No external refs found!