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  5. Solyc01g066020

Solyc01g066020


Description : disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.2)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g066020
Cluster HCCA clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
A4A49_32821 No alias tmv resistance protein n 0.05 Orthogroups_2024-Update
At1g17615 No alias Disease resistance protein (TIR-NBS class)... 0.02 Orthogroups_2024-Update
At1g72860 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.01 Orthogroups_2024-Update
At5g40100 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Brara.B00767.1 No alias effector receptor *(NLR) 0.07 Orthogroups_2024-Update
Brara.B02529.1 No alias effector receptor *(NLR) 0.01 Orthogroups_2024-Update
Brara.B02902.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.C04586.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.D01147.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.G03158.1 No alias effector receptor *(NLR) 0.01 Orthogroups_2024-Update
Brara.G03299.1 No alias effector receptor *(NLR) 0.01 Orthogroups_2024-Update
Brara.G03674.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H02461.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.I01369.1 No alias effector receptor *(NLR) 0.01 Orthogroups_2024-Update
Brara.I04821.1 No alias effector receptor *(NLR) 0.11 Orthogroups_2024-Update
Glyma.01G125300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 Orthogroups_2024-Update
Glyma.03G077400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G259150 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.07G067900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.08G192900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.09G056400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Orthogroups_2024-Update
Glyma.12G240100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.14G151100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G086500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 Orthogroups_2024-Update
Glyma.16G159100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G214000 No alias Disease resistance protein (NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.18G116601 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Orthogroups_2024-Update
MA_10427411g0010 No alias (at1g27170 : 153.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
MA_6955505g0010 No alias (at5g36930 : 167.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
MA_9636196g0010 No alias (at5g36930 : 88.6) Disease resistance protein... 0.01 Orthogroups_2024-Update
Potri.005G031600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Orthogroups_2024-Update
Potri.011G009250 No alias transmembrane receptors;ATP binding 0.02 Orthogroups_2024-Update
Potri.013G097000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.017G105000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.01 Orthogroups_2024-Update
Potri.019G070460 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.T129400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Pp1s158_140V6 No alias tmv resistance protein 0.07 Orthogroups_2024-Update
Solyc09g007710 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.05 Orthogroups_2024-Update
Sopen01g027560 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000157 TIR_dom 18 182
IPR002182 NB-ARC 202 447
No external refs found!