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  5. Solyc05g052040

Solyc05g052040


Description : Ethylene-responsive transcription factor (AHRD V3.3 *** M4WYH8_GOSHI)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g052040
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
92334 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.03 Orthogroups_2024-Update
A4A49_30015 No alias ethylene-responsive transcription factor erf019 0.03 Orthogroups_2024-Update
A4A49_38093 No alias ethylene-responsive transcription factor erf034 0.02 Orthogroups_2024-Update
A4A49_38622 No alias dehydration-responsive element-binding protein 3 0.04 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.03 Orthogroups_2024-Update
At2g36450 No alias Ethylene-responsive transcription factor ERF024... 0.03 Orthogroups_2024-Update
At3g14230 No alias Ethylene-responsive transcription factor RAP2-2... 0.03 Orthogroups_2024-Update
At4g16750 No alias Ethylene-responsive transcription factor ERF039... 0.03 Orthogroups_2024-Update
Bradi2g21060 No alias erf domain protein 9 0.05 Orthogroups_2024-Update
Bradi5g08380 No alias related to AP2 6l 0.03 Orthogroups_2024-Update
Bradi5g17610 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.H01995.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.I01789.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.I05105.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G369472 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Glyma.05G049800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G092800 No alias cooperatively regulated by ethylene and jasmonate 1 0.03 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G202300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G242600 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.15G079100 No alias ethylene responsive element binding factor 2 0.03 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G062380.3 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g39590 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_20987g0010 No alias (at2g35700 : 127.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Mp7g13760.1 No alias transcription factor (DREB) 0.02 Orthogroups_2024-Update
PSME_00005187-RA No alias (at4g17500 : 144.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00050134-RA No alias (at5g19790 : 92.0) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
Potri.001G067600 No alias related to AP2 6l 0.02 Orthogroups_2024-Update
Potri.002G039000 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
Potri.002G124000 No alias related to AP2 1 0.02 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s126_30V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s259_97V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.6G023700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G173100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G283300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g026270 No alias CBF 0.03 Orthogroups_2024-Update
Solyc04g051360 No alias Ethylene Response Factor D.1 0.04 Orthogroups_2024-Update
Solyc06g065820 No alias Ethylene Response Factor H.1 0.04 Orthogroups_2024-Update
Solyc09g089910 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 210 260
No external refs found!