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  5. Solyc05g052260

Solyc05g052260


Description : appr-1-p processing enzyme family protein (AHRD V3.3 *** AT2G40600.1)


Gene families : OG_42_0002943 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g052260
Cluster HCCA clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
89486 No alias appr-1-p processing enzyme family protein 0.04 Orthogroups_2024-Update
LOC_Os08g04480 No alias appr-1-p processing enzyme family protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00046058-RA No alias (at2g40600 : 186.0) appr-1-p processing enzyme family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002589 Macro_dom 120 237
No external refs found!