1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g052710

Solyc05g052710


Description : 30S ribosomal protein S31 (AHRD V3.3 *** A0A0K9P6K0_ZOSMR),Pfam:PF17067


Gene families : OG_42_0003423 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003423_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g052710
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Bradi1g38630 No alias plastid-specific ribosomal protein 4 0.04 Orthogroups_2024-Update
Brara.D01258.1 No alias component *(bTHXm) of small mitoribosomal-subunit proteome 0.03 Orthogroups_2024-Update
HORVU7Hr1G079190.2 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Kfl00060_0270 kfl00060_0270_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.016G113700 No alias plastid-specific ribosomal protein 4 0.04 Orthogroups_2024-Update
Pp1s258_80V6 No alias 30s ribosomal protein s31 0.06 Orthogroups_2024-Update
Pp1s29_213V6 No alias F16M14.7; chloroplast 30S ribosomal protein S31 (PSRP4)... 0.05 Orthogroups_2024-Update
Seita.4G218100.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Sobic.003G393800.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!