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  5. Solyc05g053240

Solyc05g053240


Description : Squamosa promoter binding protein12b


Gene families : OG_42_0001541 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc05g053240
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Bradi3g40240 No alias squamosa promoter binding protein-like 14 0.03 Orthogroups_2024-Update
Glyma.09G082000 No alias squamosa promoter-binding protein-like 12 0.03 Orthogroups_2024-Update
Glyma.20G006400 No alias squamosa promoter binding protein-like 14 0.04 Orthogroups_2024-Update
Potri.014G114300 No alias squamosa promoter-binding protein-like 12 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 150 223
No external refs found!