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  5. Solyc05g053520

Solyc05g053520


Description : DNA polymerase delta subunit 4 family (AHRD V3.3 *** D7KJU8_ARALL)


Gene families : OG_42_0002479 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g053520
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cre06.g292950 No alias polymerase delta 4 0.01 Orthogroups_2024-Update
Mp1g28120.1 No alias component POLD4 of DNA polymerase delta complex 0.03 Orthogroups_2024-Update
Sopen05g032040 No alias DNA polymerase delta, subunit 4 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006260 DNA replication IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000940 condensed chromosome outer kinetochore IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005874 microtubule IEP Predicted GO
CC GO:0005876 spindle microtubule IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
CC GO:0099080 supramolecular complex IEP Predicted GO
CC GO:0099081 supramolecular polymer IEP Predicted GO
CC GO:0099512 supramolecular fiber IEP Predicted GO
CC GO:0099513 polymeric cytoskeletal fiber IEP Predicted GO
InterPro domains Description Start Stop
IPR007218 DNA_pol_delta_4 62 121
No external refs found!