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  5. Solyc05g053620

Solyc05g053620


Description : F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g053620
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
A4A49_29738 No alias f-box protein pp2-b15 0.02 Orthogroups_2024-Update
At5g45080 No alias Protein PHLOEM PROTEIN 2-LIKE A6... 0.02 Orthogroups_2024-Update
Brara.F03422.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03423.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.03G233800 No alias phloem protein 2-B15 0.02 Orthogroups_2024-Update
HORVU4Hr1G021480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 4 164
No external refs found!