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  5. Solyc05g053850

Solyc05g053850


Description : protein SELF PRUNING 5G


Gene families : OG_42_0000178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g053850
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Bradi4g39760 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.04 Orthogroups_2024-Update
Brara.B00114.1 No alias effector protein *(TFL/BFT/CEN) 0.03 Orthogroups_2024-Update
Glyma.19G194300 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G087100.1 No alias effector protein *(TFL/BFT/CEN) & florigen component *(FT) 0.04 Orthogroups_2024-Update
HORVU7Hr1G024610.1 No alias effector protein *(TFL/BFT/CEN) & florigen component *(FT) 0.04 Orthogroups_2024-Update
LOC_Os01g10590 No alias osFTL8 FT-Like8 homologous to Flowering Locus T gene;... 0.03 Orthogroups_2024-Update
LOC_Os01g11940 No alias osFTL1 FT-Like1 homologous to Flowering Locus T gene;... 0.02 Orthogroups_2024-Update
LOC_Os11g18870 No alias osFTL11 FT-Like11 homologous to Flowering Locus T ... 0.02 Orthogroups_2024-Update
Seita.1G223300.1 No alias florigen component *(FT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR008914 PEBP 49 162
No external refs found!