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  5. Solyc05g054510

Solyc05g054510


Description : Dof zinc finger protein (AHRD V3.3 *** A0A0K9PZW2_ZOSMR)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g054510
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
At2g37590 No alias Dof zinc finger protein DOF2.4... 0.03 Orthogroups_2024-Update
At4g38000 No alias DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8] 0.03 Orthogroups_2024-Update
Bradi2g19930 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Brara.D02805.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G042218 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.11G059300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G335200 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.20G216600 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU3Hr1G116260.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU5Hr1G021290.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
MA_944867g0010 No alias (at3g47500 : 129.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.002G129600 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Potri.005G134200 No alias TARGET OF MONOPTEROS 6 0.05 Orthogroups_2024-Update
Potri.005G149100 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.03 Orthogroups_2024-Update
Solyc02g090310 No alias Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g032780 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 81 136
No external refs found!