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  5. Solyc05g054650

Solyc05g054650


Description : Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR)


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g054650
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_41461 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
At1g27730 No alias Zinc finger protein ZAT10... 0.05 Orthogroups_2024-Update
At3g10470 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
At3g49930 No alias At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24] 0.03 Orthogroups_2024-Update
At5g04390 No alias C2H2-type zinc finger family protein... 0.02 Orthogroups_2024-Update
Bradi5g00530 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Brara.C04299.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.F02478.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G035103 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
GRMZM2G113860 No alias zinc-finger protein 2 0.04 Orthogroups_2024-Update
GRMZM2G361210 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.03G186000 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.06G045400 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Glyma.13G073300 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.13G321900 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G097500.3 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G112930.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G113090.1 No alias C2H2-type subclass ZAT transcription factor 0.01 Orthogroups_2024-Update
HORVU5Hr1G113100.1 No alias C2H2-type subclass ZAT transcription factor 0.01 Orthogroups_2024-Update
LOC_Os03g60570 No alias ZOS3-22 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g08060 No alias ZOS4-03 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46670 No alias ZOS4-09 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_109421g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_23050g0010 No alias (at2g45120 : 95.1) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
MA_40018g0010 No alias (at1g02040 : 97.8) C2H2-type zinc finger family protein;... 0.02 Orthogroups_2024-Update
MA_70076g0010 No alias (at1g02040 : 115.0) C2H2-type zinc finger family... 0.04 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00025744-RA No alias (at2g45120 : 97.8) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
PSME_00052819-RA No alias (at2g45120 : 101.0) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
PSME_00056418-RA No alias (at1g02040 : 111.0) C2H2-type zinc finger family... 0.03 Orthogroups_2024-Update
PSME_00056793-RA No alias (at1g02040 : 87.8) C2H2-type zinc finger family protein;... 0.03 Orthogroups_2024-Update
Potri.001G235800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Orthogroups_2024-Update
Potri.002G119300 No alias salt tolerance zinc finger 0.05 Orthogroups_2024-Update
Potri.008G051200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G209400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.06 Orthogroups_2024-Update
Seita.8G247200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G248000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Seita.9G169700.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Seita.9G357600.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Seita.9G449600.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G330100.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G330200.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Solyc06g060480 No alias Zinc finger family protein (AHRD V3.3 *** B9HPY6_POPTR) 0.04 Orthogroups_2024-Update
Sopen01g049430 No alias C2H2-type zinc finger 0.03 Orthogroups_2024-Update
Sopen05g033130 No alias C2H2-type zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!