Solyc05g054890


Description : ABC transporter family protein (AHRD V3.3 *** B9HTY6_POPTR)


Gene families : OG_42_0001141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g054890
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
At5g13580 No alias ABC transporter G family member 6... 0.02 Orthogroups_2024-Update
Bradi1g66120 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
MA_10432886g0010 No alias (at2g37360 : 717.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update
Potri.014G080200 No alias ABC-2 type transporter family protein 0.04 Orthogroups_2024-Update
Sobic.001G413700.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0009055 electron transfer activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 447 654
IPR003439 ABC_transporter-like 129 281
IPR003245 Phytocyanin_dom 765 843
No external refs found!