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  5. Solyc05g054970

Solyc05g054970


Description : Ankyrin repeat family protein (AHRD V3.3 *** AT3G04470.1)


Gene families : OG_42_0000816 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g054970
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
110129 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
GRMZM2G058289 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Mp3g08700.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
PSME_00045547-RA No alias (at1g04780 : 301.0) Ankyrin repeat family protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006808 regulation of nitrogen utilization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
InterPro domains Description Start Stop
IPR021832 ANKRD13 184 615
No external refs found!