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  5. Solyc05g055170

Solyc05g055170


Description : Charged multivesicular body protein 5 (AHRD V3.3 *** W9R7A4_9ROSA)


Gene families : OG_42_0003267 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g055170
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G000030.13 No alias associated protein of ESCRT-III complex *(VPS60) 0.02 Orthogroups_2024-Update
HORVU3Hr1G014580.3 No alias associated protein of ESCRT-III complex *(VPS60) 0.02 Orthogroups_2024-Update
Kfl00085_0440 kfl00085_0440_v1.1 (at5g04850 : 277.0) VPS60.2; CONTAINS InterPro DOMAIN/s:... 0.02 Orthogroups_2024-Update
Sopen05g033590 No alias Snf7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 206
No external refs found!