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  5. Solyc05g055180

Solyc05g055180


Description : FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** AT3G44190.1)


Gene families : OG_42_0002091 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g055180
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_38789 No alias hypothetical protein 0.03 Orthogroups_2024-Update
PSME_00001852-RA No alias (at3g44190 : 406.0) FAD/NAD(P)-binding oxidoreductase... 0.02 Orthogroups_2024-Update
Potri.001G217800 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.02 Orthogroups_2024-Update
Sopen05g033600 No alias Pyridine nucleotide-disulphide oxidoreductase 0.03 Orthogroups_2024-Update
evm.model.contig_4404.6 No alias (at3g44190 : 182.0) FAD/NAD(P)-binding oxidoreductase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR023753 FAD/NAD-binding_dom 9 273
No external refs found!