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  5. Solyc05g055390

Solyc05g055390


Description : RING/U-box superfamily protein (AHRD V3.3 *** A0A061DVK5_THECC)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g055390
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
402335 No alias AtL5 0.02 Orthogroups_2024-Update
438576 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G310600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G070640.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G028410.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.5G149000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G209500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc06g061250 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
evm.model.contig_2025.32 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 86 129
No external refs found!