Solyc05g055480

Description : NAC (AHRD V3.3 *** J7H8R1_CESNO)

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc05g055480
Cluster	HCCA clusters: Cluster_218

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Brara.E03531.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
Brara.F01598.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02675.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G167400	No alias	NAC domain containing protein 57	0.03	Orthogroups_2024-Update
HORVU2Hr1G017350.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os07g48550	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g40030	No alias	CUP-SHAPED COTYLEDON3, putative, expressed	0.03	Orthogroups_2024-Update
Potri.017G139500	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
Pp1s182_37V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Pp1s279_85V6	No alias	no apical meristem	0.02	Orthogroups_2024-Update
Solyc02g084350	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen05g033930	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predicted GO
BP	GO:0015977	carbon fixation	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	19	144

External Links

No external refs found!

Solyc05g055480

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation