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  5. Solyc05g055940

Solyc05g055940


Description : Myb-like transcription factor family protein (AHRD V3.3 *** G7KXD8_MEDTR)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g055940
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Brara.I02613.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.03G143600 No alias myb-like HTH transcriptional regulator family protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G068930.39 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G051080.3 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
HORVU7Hr1G107670.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Kfl00030_0250 kfl00030_0250_v1.... (at2g01060 : 108.0) myb-like HTH transcriptional... 0.02 Orthogroups_2024-Update
LOC_Os08g25799 No alias Myb transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00010688-RA No alias (at4g13640 : 154.0) unfertilized embryo sac 16 (UNE16);... 0.03 Orthogroups_2024-Update
Potri.016G117000 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Pp1s49_140V6 No alias KANADI 2 0.03 Orthogroups_2024-Update
Pp1s60_59V6 No alias myb-cc type transfactor 0.02 Orthogroups_2024-Update
Seita.1G069400.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.04 Orthogroups_2024-Update
Seita.2G436900.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.7G223500.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G422000.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G058700.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.02 Orthogroups_2024-Update
Sopen04g033180 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 255 306
IPR025756 Myb_CC_LHEQLE 338 383
No external refs found!