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  5. Solyc05g056030

Solyc05g056030


Description : Patatin (AHRD V3.3 *** K4C2S8_SOLLC)


Gene families : OG_42_0000819 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g056030
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
A4A49_34662 No alias patatin-like protein 6 0.03 Orthogroups_2024-Update
GRMZM2G002993 No alias patatin-like protein 6 0.03 Orthogroups_2024-Update
Glyma.20G179600 No alias PATATIN-like protein 6 0.03 Orthogroups_2024-Update
HORVU5Hr1G093250.1 No alias phospholipase-A2 *(pPLA2-III)) 0.02 Orthogroups_2024-Update
LOC_Os07g05110 No alias PLA IIIA/PLP7, putative, expressed 0.04 Orthogroups_2024-Update
MA_443549g0010 No alias (at2g39220 : 189.0) PATATIN-like protein 6 (PLP6);... 0.03 Orthogroups_2024-Update
Seita.9G159300.1 No alias phospholipase-A2 *(pPLA2-III)) 0.04 Orthogroups_2024-Update
Seita.9G159500.1 No alias phospholipase-A2 *(pPLA2-III)) 0.02 Orthogroups_2024-Update
Sopen05g034440 No alias Patatin-like phospholipase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 81 293
No external refs found!