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  5. Solyc06g005330

Solyc06g005330


Description : R2R3MYB transcription factor 59


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g005330
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
39516 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_10737 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_27195 No alias myb-related protein pp2 0.04 Orthogroups_2024-Update
A4A49_28222 No alias transcription factor rax3 0.03 Orthogroups_2024-Update
A4A49_34201 No alias transcription factor myb82 0.04 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.04 Orthogroups_2024-Update
At1g79180 No alias myb domain protein 63 [Source:TAIR;Acc:AT1G79180] 0.02 Orthogroups_2024-Update
At2g26960 No alias Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1] 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.03 Orthogroups_2024-Update
At3g49690 No alias RAX3 [Source:UniProtKB/TrEMBL;Acc:A0A178VK29] 0.02 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.03 Orthogroups_2024-Update
Bradi2g24400 No alias myb domain protein 6 0.02 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.A01271.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03738.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C03242.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.G02266.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03164.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01367.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G017268 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
GRMZM2G041415 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.03G006600 No alias myb domain protein 60 0.02 Orthogroups_2024-Update
Glyma.03G258700 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.07G126900 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.11G215800 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
Glyma.12G066000 No alias myb domain protein 59 0.07 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.13G339900 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.15G259400 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
Glyma.19G038100 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.19G219000 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Glyma.19G224600 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
HORVU4Hr1G052490.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G083910.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G103970.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os08g33150 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10432903g0010 No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.03 Orthogroups_2024-Update
MA_128244g0010 No alias (at3g61250 : 275.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_37058g0010 No alias (at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.01 Orthogroups_2024-Update
PSME_00050855-RA No alias "(at2g47460 : 188.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00053156-RA No alias (at1g48000 : 177.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
Potri.004G126700 No alias myb domain protein 96 0.03 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.009G134000 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.015G143500 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Potri.017G075000 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.02 Orthogroups_2024-Update
Potri.017G099500 No alias myb domain protein 121 0.03 Orthogroups_2024-Update
Potri.019G081500 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
Seita.1G250600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.05 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G055800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G142100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G028900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.6G238400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G390800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G273800.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.01 Orthogroups_2024-Update
Sobic.005G224800.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sopen03g001570 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g001300 No alias Myb-like DNA-binding domain 0.13 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen07g002850 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 61 105
IPR001005 SANT/Myb 8 55
No external refs found!