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Description : histone H4 (AHRD V3.3 *** AT2G28740.1)
Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc06g005420 | |
| Cluster | HCCA clusters: Cluster_185 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_59902 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
| A4A49_60016 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
| AC196961.2_FG003 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| AC212565.3_FG001 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At1g07820 | No alias | Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] | 0.03 | Orthogroups_2024-Update | |
| At2g28740 | No alias | Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] | 0.03 | Orthogroups_2024-Update | |
| At3g53730 | No alias | Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] | 0.03 | Orthogroups_2024-Update | |
| Brara.C01885.1 | No alias | histone *(H4) | 0.04 | Orthogroups_2024-Update | |
| Brara.D02284.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
| Brara.F00466.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
| Brara.F00478.1 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
| Brara.G01399.1 | No alias | histone *(H4) | 0.05 | Orthogroups_2024-Update | |
| Brara.H02899.1 | No alias | histone *(H4) | 0.04 | Orthogroups_2024-Update | |
| Brara.I03658.1 | No alias | histone *(H4) | 0.06 | Orthogroups_2024-Update | |
| Cre06.g264600 | No alias | histone H4 | 0.01 | Orthogroups_2024-Update | |
| Cre06.g265050 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Cre06.g265200 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g268000 | No alias | histone H4 | 0.01 | Orthogroups_2024-Update | |
| Cre06.g268400 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Cre06.g271300 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre06.g274300 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre06.g274900 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g275700 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g276650 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre12.g504600 | No alias | histone H4 | 0.01 | Orthogroups_2024-Update | |
| Cre12.g504850 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre12.g505450 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Cre12.g506450 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Cre17.g708650 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Cre17.g709100 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G084195 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G143780 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G149178 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G224100 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.11G146481 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G177800 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.11G177900 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G178100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G178200 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.12G074500 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G147000 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.14G190800 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.15G043200 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.17G063200 | No alias | histone H4 | 0.05 | Orthogroups_2024-Update | |
| Glyma.18G064300 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G064401 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.20G083800 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Kfl00106_g14 | kfl00106_g14_v1.1 | (at5g59970 : 160.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Kfl00240_g19 | kfl00240_g19_v1.1 | (at5g59970 : 160.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Kfl00394_0030 | kfl00394_0030_v1.1 | (at5g59970 : 160.0) Histone superfamily protein;... | 0.01 | Orthogroups_2024-Update | |
| MA_10428555g0010 | No alias | (at5g59970 : 161.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_97951g0010 | No alias | (at5g59970 : 160.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Mp4g03090.1 | No alias | histone (H4) | 0.02 | Orthogroups_2024-Update | |
| Mp4g13440.1 | No alias | histone (H4) | 0.03 | Orthogroups_2024-Update | |
| Mp5g22460.1 | No alias | histone (H4) | 0.03 | Orthogroups_2024-Update | |
| Mp5g22470.1 | No alias | histone (H4) | 0.03 | Orthogroups_2024-Update | |
| Pp1s100_192V6 | No alias | histone h4 | 0.02 | Orthogroups_2024-Update | |
| Pp1s259_63V6 | No alias | histone h4 | 0.02 | Orthogroups_2024-Update | |
| Seita.6G125400.1 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G167500.1 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
| Sopen04g005580 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
| Sopen05g033090 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| Sopen06g001390 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
| Sopen06g001400 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
| Sopen06g032260 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
| Sopen06g032280 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| Sopen06g032360 | No alias | Core histone H2A/H2B/H3/H4 | 0.06 | Orthogroups_2024-Update | |
| Sopen06g032380 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
| Sopen11g025930 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| Sopen11g030510 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| Sopen11g030530 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
| evm.model.contig_2255.1 | No alias | (at5g59970 : 154.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predicted GO |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Predicted GO |
| CC | GO:0000922 | spindle pole | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Predicted GO |
| MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | Predicted GO |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| CC | GO:0005815 | microtubule organizing center | IEP | Predicted GO |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predicted GO |
| BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | Predicted GO |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
| BP | GO:0007020 | microtubule nucleation | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Predicted GO |
| MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
| MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| BP | GO:0036260 | RNA capping | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| MF | GO:0070568 | guanylyltransferase activity | IEP | Predicted GO |
| BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |