Solyc06g005620

Description : zinc transporter

Gene families : OG_42_0002082 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002082_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc06g005620
Cluster	HCCA clusters: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
A4A49_12304	No alias	zinc transporter 2	0.03	Orthogroups_2024-Update
Bradi1g60110	No alias	zinc transporter 11 precursor	0.03	Orthogroups_2024-Update
Glyma.15G036200	No alias	zinc transporter 11 precursor	0.03	Orthogroups_2024-Update
HORVU3Hr1G114990.1	No alias	metal cation transporter *(ZIP)	0.02	Orthogroups_2024-Update
LOC_Os03g29850	No alias	metal cation transporter, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00003715-RA	No alias	(at5g59520 : 322.0) encodes a metal ion transporter...	0.04	Orthogroups_2024-Update
Solyc07g065380	No alias	putative zinc transporter	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IEA	InterProScan predictions
MF	GO:0046873	metal ion transmembrane transporter activity	IEA	InterProScan predictions
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0044030	regulation of DNA methylation	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003689	ZIP	55	333

External Links

No external refs found!