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  5. Solyc06g005810

Solyc06g005810


Description : Ras-related protein Rab11C (AHRD V3.3 *** RB11C_LOTJA)


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g005810
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_26129 No alias ras-related protein rgp1 0.03 Orthogroups_2024-Update
A4A49_30348 No alias ras-related protein rab11d 0.03 Orthogroups_2024-Update
At2g33870 No alias ArRABA1h [Source:UniProtKB/TrEMBL;Acc:A0A178W1D1] 0.03 Orthogroups_2024-Update
Brara.J00514.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
Glyma.05G176300 No alias RAB GTPase homolog A4A 0.03 Orthogroups_2024-Update
HORVU3Hr1G061000.5 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
LOC_Os05g48980 No alias ras-related protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00015935-RA No alias (at3g12160 : 299.0) Encodes RABA4D, a member of the... 0.05 Orthogroups_2024-Update
PSME_00053433-RA No alias (q40191|rb11a_lotja : 358.0) Ras-related protein Rab11A... 0.03 Orthogroups_2024-Update
Potri.005G073000 No alias RAB GTPase homolog A4A 0.03 Orthogroups_2024-Update
Pp1s157_53V6 No alias ras-related protein rab11a 0.03 Orthogroups_2024-Update
Seita.4G179100.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Sobic.009G003800.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Sopen05g031410 No alias Ras family 0.02 Orthogroups_2024-Update
Sopen11g004900 No alias Ras family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
BP GO:0007264 small GTPase mediated signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!