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  5. Solyc06g008270

Solyc06g008270


No description available


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g008270
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_08665 No alias receptor-like protein 12 0.04 Orthogroups_2024-Update
Bradi2g03853 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Bradi2g03920 No alias receptor like protein 23 0.02 Orthogroups_2024-Update
Glyma.09G145600 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Glyma.14G106400 No alias receptor like protein 6 0.04 Orthogroups_2024-Update
Glyma.14G173400 No alias receptor like protein 24 0.03 Orthogroups_2024-Update
Glyma.16G169300 No alias receptor like protein 53 0.03 Orthogroups_2024-Update
LOC_Os01g06670 No alias hcr2-5D, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g06730 No alias verticillium wilt disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.011G054500 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Potri.011G055200 No alias receptor like protein 53 0.03 Orthogroups_2024-Update
Potri.012G009200 No alias receptor like protein 33 0.04 Orthogroups_2024-Update
Potri.012G025400 No alias receptor like protein 19 0.03 Orthogroups_2024-Update
Seita.5G116300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G164000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G249600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G033100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G075500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g005760 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Solyc12g100030 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!