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  5. Solyc06g008300

Solyc06g008300


Description : Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT4G08850.1)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g008300
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G205100 No alias receptor like protein 40 0.03 Orthogroups_2024-Update
Glyma.09G145600 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Glyma.14G042100 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Glyma.14G043300 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
HORVU7Hr1G006590.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os12g12130 No alias verticillium wilt disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.012G028500 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Seita.2G052800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G071200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G076600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g016370 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Sopen01g001770 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 54 92
IPR001611 Leu-rich_rpt 490 550
IPR001611 Leu-rich_rpt 636 694
IPR001611 Leu-rich_rpt 774 831
IPR001611 Leu-rich_rpt 566 622
IPR025875 Leu-rich_rpt_4 122 157
IPR001611 Leu-rich_rpt 443 465
No external refs found!