1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g008340

Solyc06g008340


Description : Adaptin ear-binding coat-associated protein 1 (AHRD V3.3 *** A0A072VLL1_MEDTR)


Gene families : OG_42_0002678 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002678_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g008340
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
At1g03900 No alias NAP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WMR3] 0.03 Orthogroups_2024-Update
Glyma.12G209800 No alias Adaptin ear-binding coat-associated protein 1 NECAP-1 0.03 Orthogroups_2024-Update
HORVU3Hr1G054050.2 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006897 endocytosis IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012466 NECAP_PHear 11 174
No external refs found!