Solyc06g009290

Description : ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc06g009290
Cluster	HCCA clusters: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
123915	No alias	P-glycoprotein 11	0.04	Orthogroups_2024-Update
139408	No alias	P-glycoprotein 20	0.03	Orthogroups_2024-Update
A4A49_00814	No alias	abc transporter b family member 4	0.03	Orthogroups_2024-Update
At3g28360	No alias	ABC transporter B family member 16...	0.05	Orthogroups_2024-Update
At5g46540	No alias	ABC transporter B family member 7...	0.03	Orthogroups_2024-Update
Bradi2g47410	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Brara.G00386.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Brara.I00320.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Brara.I01830.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Brara.K00170.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
GRMZM2G333183	No alias	ATP binding cassette subfamily B1	0.03	Orthogroups_2024-Update
Glyma.02G008000	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Glyma.13G118500	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
Glyma.13G119000	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
HORVU2Hr1G001450.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
HORVU3Hr1G065240.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
HORVU3Hr1G065280.5	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
HORVU3Hr1G068650.8	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
LOC_Os01g52550	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g46680	No alias	multidrug resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g40570	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_10436810g0020	No alias	(at3g28345 : 992.0) ABC transporter family protein;...	0.05	Orthogroups_2024-Update
MA_107576g0010	No alias	(q6yuu5\|mdr_orysa : 852.0) Putative multidrug resistance...	0.03	Orthogroups_2024-Update
MA_6870g0010	No alias	(q6yuu5\|mdr_orysa : 1284.0) Putative multidrug...	0.04	Orthogroups_2024-Update
MA_83806g0010	No alias	(q6yuu5\|mdr_orysa : 1360.0) Putative multidrug...	0.03	Orthogroups_2024-Update
PSME_00030174-RA	No alias	(at2g47000 : 1538.0) Multidrug resistance ...	0.02	Orthogroups_2024-Update
PSME_00039058-RA	No alias	(q6yuu5\|mdr_orysa : 1225.0) Putative multidrug...	0.02	Orthogroups_2024-Update
Potri.011G133800	No alias	P-glycoprotein 18	0.03	Orthogroups_2024-Update
Potri.014G113100	No alias	P-glycoprotein 11	0.05	Orthogroups_2024-Update
Potri.014G113500	No alias	P-glycoprotein 21	0.08	Orthogroups_2024-Update
Potri.018G087100	No alias	ABC transporter family protein	0.04	Orthogroups_2024-Update
Pp1s28_282V6	No alias	multidrug pheromone mdr abc transporter family	0.02	Orthogroups_2024-Update
Seita.5G189700.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Seita.5G283600.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.003G139300.3	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.003G267300.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.004G073400.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.006G014800.1	No alias	ABC-B-type transporter *(AMN3) & subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Solyc03g093650	No alias	ABC transporter B family protein (AHRD V3.3 *** A0A072UBK0_MEDTR)	0.03	Orthogroups_2024-Update
Sopen03g024530	No alias	ABC transporter transmembrane region	0.03	Orthogroups_2024-Update
Sopen06g004030	No alias	ABC transporter transmembrane region	0.11	Orthogroups_2024-Update
Sopen09g003060	No alias	ABC transporter transmembrane region	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004665	prephenate dehydrogenase (NADP+) activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006570	tyrosine metabolic process	IEP	Predicted GO
BP	GO:0006571	tyrosine biosynthetic process	IEP	Predicted GO
MF	GO:0008080	N-acetyltransferase activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
MF	GO:0008977	prephenate dehydrogenase (NAD+) activity	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
MF	GO:0016410	N-acyltransferase activity	IEP	Predicted GO
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
BP	GO:0022904	respiratory electron transport chain	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
CC	GO:0045275	respiratory chain complex III	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	172	445
IPR011527	ABC1_TM_dom	835	1107
IPR003439	ABC_transporter-like	516	662
IPR003439	ABC_transporter-like	1175	1325

External Links

No external refs found!

Solyc06g009290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation