Solyc06g011280

Description : Elongation factor 1-gamma 1 (AHRD V3.3 *** EF1G1_ORYSJ)

Gene families : OG_42_0003077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003077_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc06g011280
Cluster	HCCA clusters: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g37490	No alias	Translation elongation factor EF1B, gamma chain	0.19	Orthogroups_2024-Update
Brara.F00619.1	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex	0.25	Orthogroups_2024-Update
Brara.H02807.1	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex	0.12	Orthogroups_2024-Update
Brara.I05260.1	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex	0.24	Orthogroups_2024-Update
HORVU7Hr1G087050.1	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex	0.1	Orthogroups_2024-Update
LOC_Os06g37440	No alias	elongation factor 1-gamma, putative, expressed	0.03	Orthogroups_2024-Update
Mp7g04100.1	No alias	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.09	Orthogroups_2024-Update
PSME_00019786-RA	No alias	(q6yw46\|ef1g2_orysa : 603.0) Elongation factor 1-gamma 2...	0.03	Orthogroups_2024-Update
Potri.003G004700	No alias	Translation elongation factor EF1B, gamma chain	0.04	Orthogroups_2024-Update
Pp1s132_188V6	No alias	elongation factor 1-gamma 3	0.05	Orthogroups_2024-Update
Seita.4G234900.1	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex	0.12	Orthogroups_2024-Update
Seita.4G235000.1	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex	0.16	Orthogroups_2024-Update
Sobic.004G094200.1	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex	0.24	Orthogroups_2024-Update
Sopen06g005470	No alias	Elongation factor 1 gamma, conserved domain	0.19	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0006414	translational elongation	IEA	InterProScan predictions
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006177	GMP biosynthetic process	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0009163	nucleoside biosynthetic process	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
BP	GO:0046037	GMP metabolic process	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901070	guanosine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001662	EF1B_G_C	252	360
IPR004045	Glutathione_S-Trfase_N	3	75
IPR004046	GST_C	129	197

External Links

No external refs found!

Solyc06g011280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation