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  5. Solyc06g011300

Solyc06g011300


No description available


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g011300
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g01450 No alias retrotransposon protein, putative, Ty1-copia subclass, expressed 0.02 Orthogroups_2024-Update
Solyc01g067050 No alias No description available 0.05 Orthogroups_2024-Update
Solyc01g080060 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g049460 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g054830 No alias No description available 0.05 Orthogroups_2024-Update
Sopen01g027290 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen02g011710 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen03g021340 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen04g006060 No alias gag-polypeptide of LTR copia-type 0.02 Orthogroups_2024-Update
Sopen05g008430 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen05g009400 No alias gag-polypeptide of LTR copia-type 0.02 Orthogroups_2024-Update
Sopen06g008010 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen07g008090 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen08g009250 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen10g017070 No alias Integrase core domain 0.02 Orthogroups_2024-Update
Sopen12g005690 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!