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  5. Solyc06g011400

Solyc06g011400


No description available


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g011400
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
418378 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
A4A49_26399 No alias chaperone protein clpb1 0.02 Orthogroups_2024-Update
At2g25140 No alias Chaperone protein ClpB4, mitochondrial... 0.03 Orthogroups_2024-Update
GRMZM2G162968 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
GRMZM2G360681 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Glyma.04G062200 No alias casein lytic proteinase B4 0.05 Orthogroups_2024-Update
Glyma.06G202200 No alias heat shock protein 101 0.03 Orthogroups_2024-Update
Glyma.17G077500 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
HORVU6Hr1G028690.3 No alias organellar chaperone *(Clp-p/Clp-m) 0.02 Orthogroups_2024-Update
MA_8475g0010 No alias (at1g74310 : 741.0) Encodes ClpB1, which belongs to the... 0.02 Orthogroups_2024-Update
Mp1g02560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.02 Orthogroups_2024-Update
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.02 Orthogroups_2024-Update
Potri.015G056900 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Pp1s81_51V6 No alias atpase aaa-2 domain protein 0.02 Orthogroups_2024-Update
Sopen06g006060 No alias AAA domain (Cdc48 subfamily) 0.06 Orthogroups_2024-Update
evm.model.contig_3516.2 No alias (at1g74310 : 794.0) Encodes ClpB1, which belongs to the... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000228 nuclear chromosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0042555 MCM complex IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!