1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g016760

Solyc06g016760


Description : gamma-secretase subunit (AHRD V3.3 *-* AT5G09310.1)


Gene families : OG_42_0007927 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007927_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g016760
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
At5g09310 No alias Probable gamma-secretase subunit PEN-2... 0.02 Orthogroups_2024-Update
Sopen06g005870 No alias Presenilin enhancer-2 subunit of gamma secretase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR019379 Gamma_Secretase_Asp_P_PEN2 144 233
No external refs found!