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  5. Solyc06g018000

Solyc06g018000


Description : LOW QUALITY:Protein Ycf2 (AHRD V3.3 *-* YCF2_SOLLC)


Gene families : OG_42_0001300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g018000
Cluster HCCA clusters: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
Solyc04g024550 No alias Protein Ycf2 (AHRD V3.3 *-* YCF2_TOBAC) 0.03 Orthogroups_2024-Update
Solyc04g039760 No alias Protein Ycf2 (AHRD V3.3 *-* YCF2_SOLLC) 0.02 Orthogroups_2024-Update
Solyc04g050840 No alias Protein Ycf2 (AHRD V3.3 *-* U3R4Y1_9ASTE) 0.03 Orthogroups_2024-Update
Solyc11g030820 No alias LOW QUALITY:Protein Ycf2 (AHRD V3.3 *-* YCF2_IPOPU) 0.05 Orthogroups_2024-Update
Solyc12g035760 No alias LOW QUALITY:Protein Ycf2 (AHRD V3.3 *-* YCF2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc12g035790 No alias Protein Ycf2 (AHRD V3.3 *-* YCF2_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!