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No description available
Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc01g067050 | |
| Cluster | HCCA clusters: Cluster_308 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.D01170.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g38740 | No alias | retrotransposon protein, putative, Ty1-copia subclass, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g45040 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g30360 | No alias | retrotransposon protein, putative, Ty1-copia subclass | 0.02 | Orthogroups_2024-Update | |
| LOC_Os10g04640 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
| Potri.009G166500 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Solyc01g080060 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc03g043680 | No alias | No description available | 0.04 | Orthogroups_2024-Update | |
| Solyc03g093580 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc05g041460 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc06g011300 | No alias | No description available | 0.05 | Orthogroups_2024-Update | |
| Solyc06g011310 | No alias | No description available | 0.06 | Orthogroups_2024-Update | |
| Solyc07g009390 | No alias | No description available | 0.05 | Orthogroups_2024-Update | |
| Solyc07g009400 | No alias | No description available | 0.06 | Orthogroups_2024-Update | |
| Solyc09g015410 | No alias | No description available | 0.04 | Orthogroups_2024-Update | |
| Solyc09g030500 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc10g049460 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc10g054830 | No alias | No description available | 0.06 | Orthogroups_2024-Update | |
| Sopen01g027030 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen01g027290 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g028070 | No alias | gag-polypeptide of LTR copia-type | 0.03 | Orthogroups_2024-Update | |
| Sopen03g010550 | No alias | Domain of unknown function (DUF4219) | 0.03 | Orthogroups_2024-Update | |
| Sopen03g020190 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen03g021340 | No alias | gag-polypeptide of LTR copia-type | 0.02 | Orthogroups_2024-Update | |
| Sopen03g025800 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen04g006060 | No alias | gag-polypeptide of LTR copia-type | 0.03 | Orthogroups_2024-Update | |
| Sopen05g008430 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen07g008090 | No alias | Integrase core domain | 0.02 | Orthogroups_2024-Update | |
| Sopen07g023540 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen08g006540 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen08g008510 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen08g009250 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen09g027810 | No alias | gag-polypeptide of LTR copia-type | 0.03 | Orthogroups_2024-Update | |
| Sopen10g020560 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen11g014800 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen12g005690 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
| MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
| BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
| MF | GO:0016168 | chlorophyll binding | IEP | Predicted GO |
| MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Predicted GO |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Predicted GO |
| MF | GO:0019825 | oxygen binding | IEP | Predicted GO |
| MF | GO:0030570 | pectate lyase activity | IEP | Predicted GO |
| BP | GO:0032957 | inositol trisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
| MF | GO:0047325 | inositol tetrakisphosphate 1-kinase activity | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
| MF | GO:0051765 | inositol tetrakisphosphate kinase activity | IEP | Predicted GO |
| MF | GO:0051766 | inositol trisphosphate kinase activity | IEP | Predicted GO |
| MF | GO:0052725 | inositol-1,3,4-trisphosphate 6-kinase activity | IEP | Predicted GO |
| MF | GO:0052726 | inositol-1,3,4-trisphosphate 5-kinase activity | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |