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  5. Solyc06g030510

Solyc06g030510


Description : hAT transposon superfamily (AHRD V3.3 *** AT4G15020.2)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g030510
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Brara.K01716.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Cre04.g217966 No alias hAT transposon superfamily 0.02 Orthogroups_2024-Update
Glyma.19G069000 No alias hAT transposon superfamily 0.04 Orthogroups_2024-Update
LOC_Os05g26110 No alias transposon protein, putative, Mutator sub-class, expressed 0.02 Orthogroups_2024-Update
MA_10437182g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00033256-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00055084-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Solyc02g043850 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007021 DUF659 216 367
IPR003656 Znf_BED 16 54
IPR008906 HATC_C_dom 582 654
No external refs found!