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  5. Solyc06g033800

Solyc06g033800


Description : LOW QUALITY:RNA-binding family protein (AHRD V3.3 *-* B9GTK9_POPTR)


Gene families : OG_42_0000999 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g033800
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Seita.2G282800.1 No alias RNA splicing regulator *(NSR) 0.01 Orthogroups_2024-Update
Solyc06g052100 No alias RNA-binding family protein (AHRD V3.3 *-* B9GTK9_POPTR) 0.04 Orthogroups_2024-Update
Solyc06g052120 No alias No description available 0.04 Orthogroups_2024-Update
Solyc06g052140 No alias RNA-binding family protein (AHRD V3.3 --* B9GTK9_POPTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 68 121
No external refs found!