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  5. Solyc06g035450

Solyc06g035450


Description : Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9R9L5_RICCO)


Gene families : OG_42_0157086 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc06g035450
Cluster HCCA clusters: Cluster_80


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000390 spliceosomal complex disassembly IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005684 U2-type spliceosomal complex IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0032988 ribonucleoprotein complex disassembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0071008 U2-type post-mRNA release spliceosomal complex IEP Predicted GO
CC GO:0071014 post-mRNA release spliceosomal complex IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 134 310
No external refs found!