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  5. Solyc06g036050

Solyc06g036050


Description : 60S ribosomal protein L36 (AHRD V3.3 *** K4C4X4_SOLLC)


Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g036050
Cluster HCCA clusters: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
267958 No alias Ribosomal protein L36e family protein 0.07 Orthogroups_2024-Update
439710 No alias Ribosomal protein L36e family protein 0.08 Orthogroups_2024-Update
At2g37600 No alias 60S ribosomal protein L36-1... 0.1 Orthogroups_2024-Update
At3g53740 No alias 60S ribosomal protein L36... 0.02 Orthogroups_2024-Update
Bradi2g23260 No alias Ribosomal protein L36e family protein 0.08 Orthogroups_2024-Update
Bradi2g54600 No alias Ribosomal protein L36e family protein 0.03 Orthogroups_2024-Update
Brara.C01889.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Brara.D02287.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Brara.E00749.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Brara.G01608.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.I03660.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre12.g484050 No alias Ribosomal protein L36e family protein 0.18 Orthogroups_2024-Update
GRMZM2G009936 No alias Ribosomal protein L36e family protein 0.04 Orthogroups_2024-Update
GRMZM5G850966 No alias Ribosomal protein L36e family protein 0.04 Orthogroups_2024-Update
Glyma.10G233900 No alias Ribosomal protein L36e family protein 0.04 Orthogroups_2024-Update
Glyma.19G047300 No alias Ribosomal protein L36e family protein 0.06 Orthogroups_2024-Update
HORVU1Hr1G072270.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
HORVU5Hr1G009610.2 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Kfl00110_0150 kfl00110_0150_v1.1 (at2g37600 : 143.0) Ribosomal protein L36e family... 0.05 Orthogroups_2024-Update
MA_10430792g0010 No alias (at3g53740 : 140.0) Ribosomal protein L36e family... 0.04 Orthogroups_2024-Update
MA_24782g0010 No alias (at3g53740 : 142.0) Ribosomal protein L36e family... 0.05 Orthogroups_2024-Update
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.04 Orthogroups_2024-Update
PSME_00032528-RA No alias (at3g53740 : 137.0) Ribosomal protein L36e family... 0.11 Orthogroups_2024-Update
PSME_00032530-RA No alias (at3g53740 : 141.0) Ribosomal protein L36e family... 0.05 Orthogroups_2024-Update
PSME_00049847-RA No alias (at3g53740 : 141.0) Ribosomal protein L36e family... 0.05 Orthogroups_2024-Update
Potri.011G066000 No alias Ribosomal protein L36e family protein 0.03 Orthogroups_2024-Update
Potri.012G142600 No alias Ribosomal protein L36e family protein 0.1 Orthogroups_2024-Update
Pp1s249_65V6 No alias 60s ribosomal protein l36-2 0.19 Orthogroups_2024-Update
Pp1s34_151V6 No alias 60s ribosomal protein l36-2 0.08 Orthogroups_2024-Update
Pp1s84_102V6 No alias 60s ribosomal protein l36-2 0.17 Orthogroups_2024-Update
Seita.3G217000.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.5G376500.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.009G163800.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Sopen03g004360 No alias Ribosomal protein L36e 0.16 Orthogroups_2024-Update
Sopen06g011800 No alias Ribosomal protein L36e 0.14 Orthogroups_2024-Update
evm.model.contig_3387.3 No alias (at2g37600 : 125.0) Ribosomal protein L36e family... 0.04 Orthogroups_2024-Update
evm.model.tig00021493.69 No alias (at2g37600 : 127.0) Ribosomal protein L36e family... 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 44 137
No external refs found!