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Description : Transducin/WD40 repeat protein (AHRD V3.3 *** G7J9R1_MEDTR)
Gene families : OG_42_0002120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc06g048480 | |
| Cluster | HCCA clusters: Cluster_228 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Potri.006G113000 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s21_398V6 | No alias | af428345_1 at3g54190 f24b22_150 | 0.02 | Orthogroups_2024-Update | |
| Seita.3G359700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predicted GO |
| BP | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0004470 | malic enzyme activity | IEP | Predicted GO |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predicted GO |
| MF | GO:0004535 | poly(A)-specific ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0050518 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | IEP | Predicted GO |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |