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  5. Solyc06g050710

Solyc06g050710


Description : Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 --* AT5G46400.3)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g050710
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Bradi3g35490 No alias Chloroplast-targeted copper chaperone protein 0.02 Orthogroups_2024-Update
Bradi4g42910 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
PSME_00047728-RA No alias (at1g23000 : 103.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Pp1s57_22V6 No alias metal ion binding 0.02 Orthogroups_2024-Update
Pp1s93_56V6 No alias heavy metal-associated domain containing expressed 0.02 Orthogroups_2024-Update
Seita.1G019100.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!