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  5. Solyc01g067550

Solyc01g067550


Description : Zinc finger transcription factor 8


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc01g067550
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Brara.A03862.1 No alias regulatory protein of RNA homeostasis 0.02 Orthogroups_2024-Update
Brara.C01681.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Sopen06g028140 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 321 344
IPR000571 Znf_CCCH 98 122
IPR000571 Znf_CCCH 52 76
IPR000571 Znf_CCCH 143 167
IPR000571 Znf_CCCH 366 390
No external refs found!