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  5. Solyc06g051490

Solyc06g051490


No description available


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g051490
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
A4A49_06501 No alias retrovirus-related pol polyprotein from transposon tnt 1-94 0.03 Orthogroups_2024-Update
Solyc06g011420 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g007200 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen01g027320 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen02g015660 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen04g006060 No alias gag-polypeptide of LTR copia-type 0.02 Orthogroups_2024-Update
Sopen10g019840 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen12g023520 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!