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  5. Solyc06g051960

Solyc06g051960


Description : Pectinesterase (AHRD V3.3 *** K4C5Y2_SOLLC)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g051960
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
101118 No alias pectin methylesterase PCR fragment F 0.02 Orthogroups_2024-Update
A4A49_03154 No alias putative pectinesterasepectinesterase inhibitor 60 0.02 Orthogroups_2024-Update
A4A49_27968 No alias pectinesterasepectinesterase inhibitor 18 0.03 Orthogroups_2024-Update
A4A49_32529 No alias putative pectinesterasepectinesterase inhibitor 28 0.02 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.02 Orthogroups_2024-Update
A4A49_40779 No alias putative pectinesterasepectinesterase inhibitor 34 0.03 Orthogroups_2024-Update
At2g26450 No alias Probable pectinesterase/pectinesterase inhibitor 13... 0.04 Orthogroups_2024-Update
At3g06830 No alias Probable pectinesterase/pectinesterase inhibitor 23... 0.03 Orthogroups_2024-Update
At3g60730 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V7L0] 0.03 Orthogroups_2024-Update
Brara.A00470.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.A03198.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.03G029100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.03G234100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.06G319000 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.09G076200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.13G115300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
HORVU4Hr1G054860.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
HORVU5Hr1G010860.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
HORVU7Hr1G032330.3 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.05 Orthogroups_2024-Update
LOC_Os08g34900 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434002g0010 No alias (at3g49220 : 399.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
MA_10434031g0010 No alias (o04886|pme1_citsi : 471.0) Pectinesterase-1 precursor... 0.04 Orthogroups_2024-Update
MA_10435891g0010 No alias (o04887|pme2_citsi : 389.0) Pectinesterase-2 precursor... 0.03 Orthogroups_2024-Update
MA_8928694g0010 No alias (at3g43270 : 214.0) Plant invertase/pectin... 0.04 Orthogroups_2024-Update
PSME_00007922-RA No alias (at1g53830 : 539.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00026861-RA No alias (at1g53830 : 537.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00029101-RA No alias (at1g53830 : 536.0) encodes a pectin methylesterase;... 0.05 Orthogroups_2024-Update
PSME_00035570-RA No alias (at1g53830 : 567.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Potri.001G209200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.011G025400 No alias methylesterase PCR A 0.04 Orthogroups_2024-Update
Potri.015G127800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Seita.6G168400.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.002G416000.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.06 Orthogroups_2024-Update
Solyc07g017600 No alias Pectinesterase (AHRD V3.3 *** K4CCH4_SOLLC) 0.04 Orthogroups_2024-Update
Sopen01g036780 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen02g024920 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen02g024940 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen05g032850 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 281 578
IPR006501 Pectinesterase_inhib_dom 76 225
No external refs found!