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  5. Solyc01g067600

Solyc01g067600


Description : Zinc finger, CW-type (AHRD V3.3 *** A0A103XJ19_CYNCS)


Gene families : OG_42_0001605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g067600
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62580 No alias CW-type Zinc Finger 0.02 Orthogroups_2024-Update
Glyma.03G211200 No alias CW-type Zinc Finger 0.03 Orthogroups_2024-Update
LOC_Os07g47360 No alias CW-type Zinc Finger, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011124 Znf_CW 638 683
No external refs found!