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  5. Solyc01g006720

Solyc01g006720


Description : ABC transporter family protein (AHRD V3.3 *** B9IIG9_POPTR)


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g006720
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At5g06530 No alias ABC transporter G family member 22... 0.03 Orthogroups_2024-Update
Bradi1g74640 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Brara.B00211.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.J02569.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Glyma.03G204800 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.10G205600 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.14G012000 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.20G174800 No alias ATP-binding casette family G25 0.03 Orthogroups_2024-Update
Potri.006G199500 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Seita.9G535000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.010G187400.1 No alias sporopollenin precursor exporter *(ABCG26) & subfamily... 0.02 Orthogroups_2024-Update
Sopen08g024060 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
evm.model.tig00020614.26 No alias (at4g27420 : 244.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 494 703
IPR003439 ABC_transporter-like 178 327
No external refs found!