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  5. Solyc06g054030

Solyc06g054030


Description : LOW QUALITY:Protease inhibitor/seed storage/lipid transfer family protein (AHRD V3.3 *** B9NBN8_POPTR)


Gene families : OG_42_0002300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g054030
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
At2g48140 No alias At2g48140/F11L15.4 [Source:UniProtKB/TrEMBL;Acc:Q94AX3] 0.04 Orthogroups_2024-Update
Brara.J00369.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G005991 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Glyma.19G158500 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Orthogroups_2024-Update
Seita.2G049800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G059600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g005210 No alias Alpha-amylase inhibitor, lipid transfer and seed storage... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 13 109
No external refs found!