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  5. Solyc06g054160

Solyc06g054160


Description : LOW QUALITY:Protein OBERON 1-like protein (AHRD V3.3 *-* A0A0B0NZZ1_GOSAR)


Gene families : OG_42_0001372 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g054160
Cluster HCCA clusters: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
Solyc09g059890 No alias LOW QUALITY:Protein OBERON 1-like protein (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc09g059900 No alias LOW QUALITY:Protein OBERON 1 (AHRD V3.3 *-* A0A1D1Z900_9ARAE) 0.06 Orthogroups_2024-Update
Solyc09g061490 No alias LOW QUALITY:Protein OBERON 1 (AHRD V3.3 *-* A0A0B2RKS8_GLYSO) 0.04 Orthogroups_2024-Update
Solyc10g018690 No alias LOW QUALITY:Protein OBERON 1-like protein (AHRD V3.3 *-*... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0032957 inositol trisphosphate metabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Predicted GO
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 18 148
No external refs found!