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  5. Solyc06g059730

Solyc06g059730


Description : SlPIN6


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g059730
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Brara.G03257.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.03 Orthogroups_2024-Update
GRMZM2G160496 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G057630.2 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
LOC_Os11g04190 No alias auxin efflux carrier component, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g21660.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Orthogroups_2024-Update
Mp6g07950.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Orthogroups_2024-Update
Pp1s10_17V6 No alias auxin efflux carrier component 0.02 Orthogroups_2024-Update
Seita.7G323600.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Solyc10g078370 No alias Auxin Efflux Facilitator 9 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 533
No external refs found!