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  5. Kfl00002_0720

Kfl00002_0720 (kfl00002_0720_v1.1)


Aliases : kfl00002_0720_v1.1

Description : (at1g50490 : 218.0) Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.; ubiquitin-conjugating enzyme 20 (UBC20); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme19 (TAIR:AT3G20060.1); Has 10004 Blast hits to 9989 proteins in 393 species: Archae - 0; Bacteria - 0; Metazoa - 4460; Fungi - 2092; Plants - 1828; Viruses - 23; Other Eukaryotes - 1601 (source: NCBI BLink). & (p35130|ubc2_medsa : 115.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0004190 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00002_0720
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
A4A49_08218 No alias ubiquitin-conjugating enzyme e2 20 0.02 Orthogroups_2024-Update
Brara.F00307.1 No alias E2 ubiquitin-conjugating protein 0.02 Orthogroups_2024-Update
Glyma.11G095700 No alias ubiquitin-conjugating enzyme19 0.02 Orthogroups_2024-Update
MA_18397g0010 No alias (at1g50490 : 245.0) Encodes one of two... 0.01 Orthogroups_2024-Update
Mp3g21700.1 No alias E2 ubiquitin conjugating protein (APC/C) 0.03 Orthogroups_2024-Update
Potri.001G254500 No alias ubiquitin-conjugating enzyme 20 0.03 Orthogroups_2024-Update
Pp1s177_14V6 No alias ubiquitin-conjugating enzyme x 0.02 Orthogroups_2024-Update
Solyc11g065190 No alias Ubiquitin-conjugating enzyme (AHRD V3.3 *** G7K9A0_MEDTR) 0.06 Orthogroups_2024-Update
Sopen11g024910 No alias Ubiquitin-conjugating enzyme 0.06 Orthogroups_2024-Update
evm.model.contig_4545.1 No alias (at1g50490 : 175.0) Encodes one of two... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0032506 cytokinetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0090529 cell septum assembly IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 36 166
No external refs found!