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  5. Solyc01g067790

Solyc01g067790


Description : BRCT domain-containing DNA repair protein, putative isoform 1 (AHRD V3.3 *** A0A061ENE5_THECC)


Gene families : OG_42_0003070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g067790
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Brara.E02063.1 No alias homologous recombination repair factor *(MDC1) 0.03 Orthogroups_2024-Update
Glyma.13G214200 No alias BRCT domain-containing DNA repair protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP Predicted GO
CC GO:0000922 spindle pole IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004532 exoribonuclease activity IEP Predicted GO
MF GO:0004535 poly(A)-specific ribonuclease activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005815 microtubule organizing center IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007020 microtubule nucleation IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001357 BRCT_dom 932 1024
No external refs found!