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  5. Solyc06g059970

Solyc06g059970


Description : TPI


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g059970
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
A4A49_14235 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_16645 No alias agamous-like mads-box protein agl11 0.03 Orthogroups_2024-Update
A4A49_18989 No alias agamous-like mads-box protein agl19 0.03 Orthogroups_2024-Update
A4A49_19521 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.04 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.03 Orthogroups_2024-Update
At1g24260 No alias At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9] 0.02 Orthogroups_2024-Update
At1g26310 No alias Transcription factor CAULIFLOWER... 0.04 Orthogroups_2024-Update
At5g23260 No alias K-box region and MADS-box transcription factor family... 0.03 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.04 Orthogroups_2024-Update
Bradi1g08340 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g57000 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.E00310.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J00749.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G133568 No alias AGAMOUS-like 16 0.03 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Glyma.04G043800 No alias AGAMOUS-like 66 0.03 Orthogroups_2024-Update
Glyma.07G081300 No alias AGAMOUS-like 6 0.03 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Glyma.20G136600 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
HORVU0Hr1G003020.3 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
HORVU5Hr1G095710.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os03g54160 No alias OsMADS14 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g38770 No alias OsMADS61 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
MA_211156g0010 No alias (q40885|ag_pethy : 164.0) Floral homeotic protein... 0.02 Orthogroups_2024-Update
Potri.001G284301 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.007G115000 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.012G100200 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Seita.3G073000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G561000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sopen01g038810 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update
Sopen02g015950 No alias K-box region 0.02 Orthogroups_2024-Update
Sopen05g011300 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!